HL_5ZLU_051

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGGGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_051 not in the Motif Atlas

Homologous match to HL_4WF9_016

Geometric discrepancy: 0.231

The information below is about HL_4WF9_016

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

5ZLU|1|V|C|487
5ZLU|1|V|G|488
5ZLU|1|V|G|489
5ZLU|1|V|G|491
5ZLU|1|V|A|492
5ZLU|1|V|G|493

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain p

50S ribosomal protein L22