HL_5ZLU_073

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

5ZLU|1|V|A|1616, 5ZLU|1|V|A|1618

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_073 not in the Motif Atlas

Homologous match to HL_7RQB_040

Geometric discrepancy: 0.1965

The information below is about HL_7RQB_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

5ZLU|1|V|C|1612
5ZLU|1|V|G|1613
5ZLU|1|V|A|1614
5ZLU|1|V|C|1615
5ZLU|1|V|A|1616
5ZLU|1|V|C|1617
5ZLU|1|V|A|1618
5ZLU|1|V|G|1619

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain p

50S ribosomal protein L22

Chain z

50S ribosomal protein L34