HL_5ZLU_075

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

5ZLU|1|V|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_075 not in the Motif Atlas

Homologous match to HL_7A0S_042

Geometric discrepancy: 0.2679

The information below is about HL_7A0S_042

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

5ZLU|1|V|C|1691
5ZLU|1|V|U|1692
5ZLU|1|V|U|1693
5ZLU|1|V|C|1694
5ZLU|1|V|G|1695
5ZLU|1|V|G|1696

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain G

Small subunit ribosomal RNA; SSU rRNA

Chain Z

50S ribosomal protein L2