HL_5ZLU_096

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CGUGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_096 not in the Motif Atlas

Homologous match to HL_4WF9_059

Geometric discrepancy: 0.2017

The information below is about HL_4WF9_059

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.8

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

352

Unit IDs

5ZLU|1|V|C|2594
5ZLU|1|V|G|2595
5ZLU|1|V|U|2596
5ZLU|1|V|G|2597
5ZLU|1|V|A|2598
5ZLU|1|V|G|2599

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain EE

Macrolide efflux protein

Chain Z

50S ribosomal protein L2