HL_5ZLU_120

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

5ZLU|1|V|U|1396, 5ZLU|1|V|U|1397

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_5ZLU_120 not in the Motif Atlas

Homologous match to HL_5J7L_168

Geometric discrepancy: 0.2057

The information below is about HL_5J7L_168

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_81545.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

7

Unit IDs

5ZLU|1|V|G|1389
5ZLU|1|V|U|1390
5ZLU|1|V|U|1391
5ZLU|1|V|A|1392
5ZLU|1|V|A|1393
5ZLU|1|V|U|1394
5ZLU|1|V|A|1395
5ZLU|1|V|U|1396
5ZLU|1|V|U|1397
5ZLU|1|V|C|1398

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain q

50S ribosomal protein L23