HL_5ZLU_123

3D structure

PDB id

5ZLU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Ribosome Structure bound to ABC-F protein.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.6 Å

Loop

Sequence

CUCCCUGGGGUGAUGAGCCCCGGGAG

Length

26 nucleotides

Bulged bases

5ZLU|1|V|C|1711, 5ZLU|1|V|C|1712, 5ZLU|1|V|U|1716, 5ZLU|1|V|U|1730, 5ZLU|1|V|G|1731, 5ZLU|1|V|A|1732

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

5ZLU|1|V|C|1708
5ZLU|1|V|U|1709
5ZLU|1|V|C|1710
5ZLU|1|V|C|1711
5ZLU|1|V|C|1712
5ZLU|1|V|U|1716
5ZLU|1|V|G|1717
5ZLU|1|V|G|1718
5ZLU|1|V|G|1725
5ZLU|1|V|G|1726
5ZLU|1|V|U|1727
5ZLU|1|V|G|1728
5ZLU|1|V|A|1729
5ZLU|1|V|U|1730
5ZLU|1|V|G|1731
5ZLU|1|V|A|1732
5ZLU|1|V|G|1733
5ZLU|1|V|C|1734
5ZLU|1|V|C|1735
5ZLU|1|V|C|1741
5ZLU|1|V|C|1742
5ZLU|1|V|G|1743
5ZLU|1|V|G|1747
5ZLU|1|V|G|1748
5ZLU|1|V|A|1749
5ZLU|1|V|G|1750

Current chains

Chain V

23S ribosomal RNA

Nearby chains

Chain G

Small subunit ribosomal RNA; SSU rRNA