HL_6AH3_011
3D structure
- PDB id
- 6AH3 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Cryo-EM structure of yeast Ribonuclease P with pre-tRNA substrate
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.48 Å
Loop
- Sequence
- GUUCGAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6AH3_011 not in the Motif Atlas
- Homologous match to HL_1U0B_003
- Geometric discrepancy: 0.1837
- The information below is about HL_1U0B_003
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_33597.6
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 139
Unit IDs
6AH3|1|T|G|53
6AH3|1|T|U|54
6AH3|1|T|U|55
6AH3|1|T|C|56
6AH3|1|T|G|57
6AH3|1|T|A|58
6AH3|1|T|U|59
6AH3|1|T|C|60
6AH3|1|T|C|61
Current chains
- Chain T
- pre-tRNA
Nearby chains
- Chain A
- Nuclear RNase P
- Chain D
- RNases MRP/P 32.9 kDa subunit
- Chain K
- Ribonuclease P protein subunit RPR2
Coloring options: