HL_6AWB_017
3D structure
- PDB id
- 6AWB (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of 30S ribosomal subunit and RNA polymerase complex in non-rotated state
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 6.7 Å
Loop
- Sequence
- GAUUAGAUACC
- Length
- 11 nucleotides
- Bulged bases
- 6AWB|1|A|A|790, 6AWB|1|A|G|791, 6AWB|1|A|U|793, 6AWB|1|A|C|795
- QA status
- Unknown status
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6AWB_017 not in the Motif Atlas
- Homologous match to HL_6CZR_088
- Geometric discrepancy: 0.4712
- The information below is about HL_6CZR_088
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 13
Unit IDs
6AWB|1|A|G|786
6AWB|1|A|A|787
6AWB|1|A|U|788
6AWB|1|A|U|789
6AWB|1|A|A|790
6AWB|1|A|G|791
6AWB|1|A|A|792
6AWB|1|A|U|793
6AWB|1|A|A|794
6AWB|1|A|C|795
6AWB|1|A|C|796
Current chains
- Chain A
- 16S rRNA
Nearby chains
- Chain N
- 30S ribosomal protein S11
- Chain X
- 30S ribosomal protein S21
Coloring options: