HL_6AWC_005

3D structure

PDB id

6AWC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of 30S ribosomal subunit and RNA polymerase complex in rotated state

Experimental method

ELECTRON MICROSCOPY

Resolution

7.9 Å

Loop

Sequence

CCUUCGGG

Length

8 nucleotides

Bulged bases

6AWC|1|A|U|208, 6AWC|1|A|U|209, 6AWC|1|A|C|210

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6AWC_005 not in the Motif Atlas

Homologous match to HL_4LFB_005

Geometric discrepancy: 0.3848

The information below is about HL_4LFB_005

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_48778.2

Basepair signature

cWW-F

Number of instances in this motif group

46

Unit IDs

6AWC|1|A|C|206
6AWC|1|A|C|207
6AWC|1|A|U|208
6AWC|1|A|U|209
6AWC|1|A|C|210
6AWC|1|A|G|211
6AWC|1|A|G|212
6AWC|1|A|G|213

Current chains

Chain A

16S rRNA

Nearby chains