HL_6AZ1_024

3D structure

PDB id

6AZ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo-EM structure of the small subunit of Leishmania ribosome bound to paromomycin

Experimental method

ELECTRON MICROSCOPY

Resolution

2.7 Å

Loop

Sequence

UCUUUCUCAGCA

Length

12 nucleotides

Bulged bases

6AZ1|1|1|U|1409, 6AZ1|1|1|A|1411

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6AZ1|1|1|U|1367
6AZ1|1|1|C|1368
6AZ1|1|1|U|1369
6AZ1|1|1|U|1370
6AZ1|1|1|U|1371
6AZ1|1|1|C|1408
6AZ1|1|1|U|1409
6AZ1|1|1|C|1410
6AZ1|1|1|A|1411
6AZ1|1|1|G|1412
6AZ1|1|1|C|1413
6AZ1|1|1|A|1414

Current chains

Chain 1

ribosomal RNA 18S

Nearby chains

Chain A

Ribosomal protein s1e

Chain c

ribosomal protein S27e