3D structure

PDB id
6BOH (explore in PDB, NAKB, or RNA 3D Hub)
Description
Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
Experimental method
X-RAY DIFFRACTION
Resolution
3.4 Å

Loop

Sequence
CGGUUCGGCCG
Length
11 nucleotides
Bulged bases
6BOH|1|A|C|1137
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
Not in a motif group
Basepair signature
Not available
Number of instances in this motif group
0

Unit IDs

6BOH|1|A|C|1132
6BOH|1|A|G|1133
6BOH|1|A|G|1134
6BOH|1|A|U|1135
6BOH|1|A|U|1136
6BOH|1|A|C|1137
6BOH|1|A|G|1138
6BOH|1|A|G|1139
6BOH|1|A|C|1140
6BOH|1|A|C|1141
6BOH|1|A|G|1142

Current chains

Chain A
16S ribosomal RNA

Nearby chains

Chain SA
30S ribosomal protein S9

Coloring options:

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