HL_6BOH_025

3D structure

PDB id

6BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGGUUCGGCCG

Length

11 nucleotides

Bulged bases

6BOH|1|A|C|1137

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOH|1|A|C|1132
6BOH|1|A|G|1133
6BOH|1|A|G|1134
6BOH|1|A|U|1135
6BOH|1|A|U|1136
6BOH|1|A|C|1137
6BOH|1|A|G|1138
6BOH|1|A|G|1139
6BOH|1|A|C|1140
6BOH|1|A|C|1141
6BOH|1|A|G|1142

Current chains

Chain A

16S ribosomal RNA

Nearby chains

Chain SA

30S ribosomal protein S9