HL_6BOH_044
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GUUCGUGGAGC
- Length
- 11 nucleotides
- Bulged bases
- 6BOH|1|B|G|386
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BOH_044 not in the Motif Atlas
- Homologous match to HL_7RQB_013
- Geometric discrepancy: 0.1194
- The information below is about HL_7RQB_013
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_91503.4
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 4
Unit IDs
6BOH|1|B|G|382
6BOH|1|B|U|383
6BOH|1|B|U|384
6BOH|1|B|C|385
6BOH|1|B|G|386
6BOH|1|B|U|387
6BOH|1|B|G|388
6BOH|1|B|G|389
6BOH|1|B|A|390
6BOH|1|B|G|391
6BOH|1|B|C|392
Current chains
- Chain B
- 23S ribosomal RNA
Nearby chains
- Chain M
- 50S ribosomal protein L15
- Chain Y
- 50S ribosomal protein L28
Coloring options: