HL_6BOH_061

3D structure

PDB id

6BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

6BOH|1|B|G|1093, 6BOH|1|B|U|1094, 6BOH|1|B|A|1095, 6BOH|1|B|A|1096

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOH|1|B|C|1092
6BOH|1|B|G|1093
6BOH|1|B|U|1094
6BOH|1|B|A|1095
6BOH|1|B|A|1096
6BOH|1|B|U|1097
6BOH|1|B|A|1098
6BOH|1|B|G|1099

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain GA

50S ribosomal protein L36

Chain I

50S ribosomal protein L6