Loop HL_6BOH

3D structure

PDB id: 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
Description: Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
Experimental method: X-RAY DIFFRACTION
Resolution: 3.4 Å

Loop

Sequence: GGGAGCCUGUGAACCCCCGCCUCCGGGUGGGGGGGAGGCGCCGGUGAAAUACC
Length: 53 nucleotides
Bulged bases: 6BOH|1|B|U|2132, 6BOH|1|B|C|2145, 6BOH|1|B|C|2146, 6BOH|1|B|C|2164
QA status: Valid loop

Sequence variability

R3DSVS

Structural variability across Equivalence Class

R3DMCS EC

Structural variability across Rfam

R3DMCS Rfam

Detailed Annotation: No text annotation
Broad Annotation: No text annotation
Motif group: Not in a motif group
Basepair signature: Not available
Number of instances in this motif group: 0

Unit IDs

6BOH|1|B|G|2123
6BOH|1|B|G|2124
6BOH|1|B|G|2125
6BOH|1|B|A|2126
6BOH|1|B|G|2127
6BOH|1|B|C|2128
6BOH|1|B|C|2129
6BOH|1|B|U|2130
6BOH|1|B|G|2131
6BOH|1|B|U|2132
6BOH|1|B|G|2133
6BOH|1|B|A|2134
6BOH|1|B|A|2135
6BOH|1|B|C|2136
6BOH|1|B|C|2137
6BOH|1|B|C|2138
6BOH|1|B|C|2139
6BOH|1|B|C|2140
6BOH|1|B|G|2141
6BOH|1|B|C|2142
6BOH|1|B|C|2143
6BOH|1|B|U|2144
6BOH|1|B|C|2145
6BOH|1|B|C|2146
6BOH|1|B|G|2147
6BOH|1|B|G|2148
6BOH|1|B|G|2149
6BOH|1|B|U|2150
6BOH|1|B|G|2151
6BOH|1|B|G|2152
6BOH|1|B|G|2153
6BOH|1|B|G|2154
6BOH|1|B|G|2155
6BOH|1|B|G|2156
6BOH|1|B|G|2157
6BOH|1|B|A|2158
6BOH|1|B|G|2159
6BOH|1|B|G|2160
6BOH|1|B|C|2161
6BOH|1|B|G|2162
6BOH|1|B|C|2163
6BOH|1|B|C|2164
6BOH|1|B|G|2165
6BOH|1|B|G|2166
6BOH|1|B|U|2167
6BOH|1|B|G|2168
6BOH|1|B|A|2169
6BOH|1|B|A|2170
6BOH|1|B|A|2171
6BOH|1|B|U|2172
6BOH|1|B|A|2173
6BOH|1|B|C|2174
6BOH|1|B|C|2175

Current chains

Chain B: 23S ribosomal RNA

Nearby chains

Chain D: Transfer RNA; tRNA
Chain UA: 30S ribosomal protein S11

HL_6BOH_083