HL_6BOH_146
3D structure
- PDB id
- 6BOH (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GCUUGUC
- Length
- 7 nucleotides
- Bulged bases
- 6BOH|1|GB|U|270|||M, 6BOH|1|GB|U|270|||P
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BOH_146 not in the Motif Atlas
- Geometric match to HL_5J7L_018
- Geometric discrepancy: 0.4
- The information below is about HL_5J7L_018
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_37344.1
- Basepair signature
- cWW-F-F
- Number of instances in this motif group
- 2
Unit IDs
6BOH|1|GB|G|270|||K
6BOH|1|GB|C|270|||L
6BOH|1|GB|U|270|||M
6BOH|1|GB|U|270|||N
6BOH|1|GB|G|270|||O
6BOH|1|GB|U|270|||P
6BOH|1|GB|C|270|||Q
Current chains
- Chain GB
- 23S ribosomal RNA
Nearby chains
- Chain DC
- 50S ribosomal protein L28
- Chain OB
- 50S ribosomal protein L9
Coloring options: