HL_6BOH_163

3D structure

PDB id

6BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGGGCCCACCAGCCUAC

Length

17 nucleotides

Bulged bases

6BOH|1|GB|C|888, 6BOH|1|GB|A|896

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOH|1|GB|G|880
6BOH|1|GB|G|881
6BOH|1|GB|G|882
6BOH|1|GB|G|883
6BOH|1|GB|C|884
6BOH|1|GB|C|885
6BOH|1|GB|C|886
6BOH|1|GB|A|887
6BOH|1|GB|C|888
6BOH|1|GB|C|889
6BOH|1|GB|A|890
6BOH|1|GB|G|892
6BOH|1|GB|C|893
6BOH|1|GB|C|894
6BOH|1|GB|U|895
6BOH|1|GB|A|896
6BOH|1|GB|C|897

Current chains

Chain GB

23S ribosomal RNA

Nearby chains

Chain BC

50S ribosomal protein L25

Chain BD

30S ribosomal protein S13

Chain SB

50S ribosomal protein L16