HL_6BOH_230

3D structure

PDB id

6BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGAAGCCCGUACGGGUGACAAC

Length

22 nucleotides

Bulged bases

6BOH|1|GB|G|1534, 6BOH|1|GB|U|1535, 6BOH|1|GB|C|1544

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOH|1|GB|G|1526
6BOH|1|GB|G|1527
6BOH|1|GB|A|1528
6BOH|1|GB|A|1529
6BOH|1|GB|G|1530
6BOH|1|GB|C|1531
6BOH|1|GB|C|1532
6BOH|1|GB|C|1533
6BOH|1|GB|G|1534
6BOH|1|GB|U|1535
6BOH|1|GB|A|1536
6BOH|1|GB|C|1537
6BOH|1|GB|G|1538
6BOH|1|GB|G|1539
6BOH|1|GB|G|1540
6BOH|1|GB|U|1541
6BOH|1|GB|G|1542
6BOH|1|GB|A|1543
6BOH|1|GB|C|1544
6BOH|1|GB|A|1545
6BOH|1|GB|A|1546
6BOH|1|GB|C|1546|||B

Current chains

Chain GB

23S ribosomal RNA

Nearby chains