HL_6BOH_236

3D structure

PDB id

6BOH (explore in PDB, NAKB, or RNA 3D Hub)

Description

Antibiotic blasticidin S and E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UUCGUGGAG

Length

9 nucleotides

Bulged bases

6BOH|1|B|U|384, 6BOH|1|B|G|386, 6BOH|1|B|G|389

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

6BOH|1|B|U|383
6BOH|1|B|U|384
6BOH|1|B|C|385
6BOH|1|B|G|386
6BOH|1|B|U|387
6BOH|1|B|G|388
6BOH|1|B|G|389
6BOH|1|B|A|390
6BOH|1|B|G|391

Current chains

Chain B

23S ribosomal RNA

Nearby chains

Chain M

50S ribosomal protein L15

Chain Y

50S ribosomal protein L28