HL_6BOK_158
3D structure
- PDB id
- 6BOK (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli release factor 1 (containing deletion 302-304) bound to the 70S ribosome
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.55 Å
Loop
- Sequence
- GGUGAGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BOK_158 not in the Motif Atlas
- Homologous match to HL_7RQB_022
- Geometric discrepancy: 0.1063
- The information below is about HL_7RQB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
6BOK|1|EB|G|712
6BOK|1|EB|G|713
6BOK|1|EB|U|714
6BOK|1|EB|G|715
6BOK|1|EB|A|716
6BOK|1|EB|G|717
6BOK|1|EB|A|718
6BOK|1|EB|C|719
Current chains
- Chain EB
- 23S ribosomal RNA
Nearby chains
- Chain BD
- 30S ribosomal protein S17
- Chain DB
- Small subunit ribosomal RNA; SSU rRNA
- Chain HB
- 50S ribosomal protein L2
- Chain ZC
- 30S ribosomal protein S15
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