HL_6BUW_064

3D structure

PDB id

6BUW (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G299A ram mutation and empty A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.5 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

6BUW|1|RA|A|1067, 6BUW|1|RA|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BUW_064 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.3875

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20174.1

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

5

Unit IDs

6BUW|1|RA|C|1064
6BUW|1|RA|U|1065
6BUW|1|RA|U|1066
6BUW|1|RA|A|1067
6BUW|1|RA|G|1068
6BUW|1|RA|A|1069
6BUW|1|RA|A|1070
6BUW|1|RA|G|1071
6BUW|1|RA|C|1072
6BUW|1|RA|A|1073
6BUW|1|RA|G|1074

Current chains

Chain RA

23S rRNA

Nearby chains