HL_6BY1_012

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

GUUAAUACC

Length

9 nucleotides

Bulged bases

6BY1|1|AA|U|467

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BY1_012 not in the Motif Atlas

Homologous match to HL_5J7L_012

Geometric discrepancy: 0.31

The information below is about HL_5J7L_012

Detailed Annotation

GNRA wlth extra near cWW

Broad Annotation

GNRA wlth extra near cWW

Motif group

HL_81538.2

Basepair signature

cWW-tSH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

6BY1|1|AA|G|462
6BY1|1|AA|U|463
6BY1|1|AA|U|464
6BY1|1|AA|A|465
6BY1|1|AA|A|466
6BY1|1|AA|U|467
6BY1|1|AA|A|468
6BY1|1|AA|C|469
6BY1|1|AA|C|470

Current chains

Chain AA

16S ribosomal RNA

Nearby chains