HL_6BY1_079
3D structure
- PDB id
- 6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli pH03H9 complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.94 Å
Loop
- Sequence
- GUUCGAUCC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_6BY1_079 not in the Motif Atlas
- Homologous match to HL_6UFG_008
- Geometric discrepancy: 0.203
- The information below is about HL_6UFG_008
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.9
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 141
Unit IDs
6BY1|1|BW|G|53
6BY1|1|BW|U|54
6BY1|1|BW|U|55
6BY1|1|BW|C|56
6BY1|1|BW|G|57
6BY1|1|BW|A|58
6BY1|1|BW|U|59
6BY1|1|BW|C|60
6BY1|1|BW|C|61
Current chains
- Chain BW
- Valine-specific transfer RNA
Nearby chains
- Chain DA
- Large subunit ribosomal RNA; LSU rRNA
- Chain DF
- 50S ribosomal protein L5
- Chain DM
- 50S ribosomal protein L16
Coloring options: