3D structure

PDB id
6BY1 (explore in PDB, NAKB, or RNA 3D Hub)
Description
E. coli pH03H9 complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.94 Å

Loop

Sequence
GGAAAC
Length
6 nucleotides
Bulged bases
6BY1|1|CA|A|125
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BY1_082 not in the Motif Atlas
Homologous match to HL_4WF9_003
Geometric discrepancy: 0.1286
The information below is about HL_4WF9_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75660.5
Basepair signature
cWW-F
Number of instances in this motif group
19

Unit IDs

6BY1|1|CA|G|123
6BY1|1|CA|G|124
6BY1|1|CA|A|125
6BY1|1|CA|A|126
6BY1|1|CA|A|127
6BY1|1|CA|C|128

Current chains

Chain CA
23S ribosomal RNA

Nearby chains

Chain C3
50S ribosomal protein L34
Chain CT
50S ribosomal protein L23

Coloring options:


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