HL_6BY1_157

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

GAAACAUC

Length

8 nucleotides

Bulged bases

6BY1|1|DA|A|196, 6BY1|1|DA|A|199

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BY1_157 not in the Motif Atlas

Geometric match to HL_7RQB_006

Geometric discrepancy: 0.1822

The information below is about HL_7RQB_006

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_06192.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

14

Unit IDs

6BY1|1|DA|G|194
6BY1|1|DA|A|195
6BY1|1|DA|A|196
6BY1|1|DA|A|197
6BY1|1|DA|C|198
6BY1|1|DA|A|199
6BY1|1|DA|U|200
6BY1|1|DA|C|201

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DL

50S ribosomal protein L15

Chain DX

50S ribosomal protein L28