HL_6BY1_169

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

CGAAUAG

Length

7 nucleotides

Bulged bases

6BY1|1|DA|A|613, 6BY1|1|DA|A|614, 6BY1|1|DA|U|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BY1_169 not in the Motif Atlas

Homologous match to HL_5J7L_151

Geometric discrepancy: 0.2189

The information below is about HL_5J7L_151

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_80922.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

3

Unit IDs

6BY1|1|DA|C|611
6BY1|1|DA|G|612
6BY1|1|DA|A|613
6BY1|1|DA|A|614
6BY1|1|DA|U|615
6BY1|1|DA|A|616
6BY1|1|DA|G|617

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain DE

50S ribosomal protein L4