HL_6BY1_171

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

UUAACUG

Length

7 nucleotides

Bulged bases

6BY1|1|DA|U|646

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BY1_171 not in the Motif Atlas

Homologous match to HL_7RQB_021

Geometric discrepancy: 0.5098

The information below is about HL_7RQB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

6BY1|1|DA|U|641
6BY1|1|DA|U|642
6BY1|1|DA|A|643
6BY1|1|DA|A|644
6BY1|1|DA|C|645
6BY1|1|DA|U|646
6BY1|1|DA|G|647

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain D2

50S ribosomal protein L33

Chain D4

50S ribosomal protein L35