HL_6BY1_193

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

6BY1|1|DA|U|1693

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BY1_193 not in the Motif Atlas

Geometric match to HL_4PDB_001

Geometric discrepancy: 0.1295

The information below is about HL_4PDB_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

6BY1|1|DA|C|1691
6BY1|1|DA|U|1692
6BY1|1|DA|U|1693
6BY1|1|DA|C|1694
6BY1|1|DA|G|1695
6BY1|1|DA|G|1696

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain BA

Small subunit ribosomal RNA; SSU rRNA

Chain DC

50S ribosomal protein L2