HL_6BY1_200

3D structure

PDB id

6BY1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli pH03H9 complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.94 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

6BY1|1|DA|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BY1_200 not in the Motif Atlas

Homologous match to HL_7RQB_049

Geometric discrepancy: 0.1265

The information below is about HL_7RQB_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_51824.1

Basepair signature

cWW-F-F-tSH-F-F

Number of instances in this motif group

8

Unit IDs

6BY1|1|DA|G|1949
6BY1|1|DA|G|1950
6BY1|1|DA|U|1951
6BY1|1|DA|A|1952
6BY1|1|DA|A|1953
6BY1|1|DA|G|1954
6BY1|1|DA|U|1955
6BY1|1|DA|U|1956
6BY1|1|DA|C|1957

Current chains

Chain DA

23S ribosomal RNA

Nearby chains

Chain BA

Small subunit ribosomal RNA; SSU rRNA

Chain DK

50S ribosomal protein L14