HL_6BZ6_021

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GAAGCAACGC

Length

10 nucleotides

Bulged bases

6BZ6|1|QA|G|971

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_021 not in the Motif Atlas

Homologous match to HL_4LFB_021

Geometric discrepancy: 0.128

The information below is about HL_4LFB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50779.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6BZ6|1|QA|G|963
6BZ6|1|QA|A|964
6BZ6|1|QA|A|965
6BZ6|1|QA|G|966
6BZ6|1|QA|C|967
6BZ6|1|QA|A|968
6BZ6|1|QA|A|969
6BZ6|1|QA|C|970
6BZ6|1|QA|G|971
6BZ6|1|QA|C|972

Current chains

Chain QA

16S rRNA

Nearby chains

Chain QI

30S ribosomal protein S9

Chain QJ

30S ribosomal protein S10

Chain QN

30S ribosomal protein S14 type Z

Chain QV

Transfer RNA; tRNA