HL_6BZ6_045

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

UUGGGAAG

Length

8 nucleotides

Bulged bases

6BZ6|1|RA|A|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_045 not in the Motif Atlas

Homologous match to HL_7RQB_010

Geometric discrepancy: 0.0953

The information below is about HL_7RQB_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

6BZ6|1|RA|U|305
6BZ6|1|RA|U|306
6BZ6|1|RA|G|307
6BZ6|1|RA|G|308
6BZ6|1|RA|G|309
6BZ6|1|RA|A|310
6BZ6|1|RA|A|311
6BZ6|1|RA|G|312

Current chains

Chain RA

23S rRNA

Nearby chains

Chain RY

50S ribosomal protein L24