3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
GGUGAGAC
Length
8 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ6_057 not in the Motif Atlas
Homologous match to HL_7RQB_022
Geometric discrepancy: 0.1249
The information below is about HL_7RQB_022
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_84085.2
Basepair signature
cWW-tSH-F-F-F-F
Number of instances in this motif group
15

Unit IDs

6BZ6|1|RA|G|712
6BZ6|1|RA|G|713
6BZ6|1|RA|U|714
6BZ6|1|RA|G|715
6BZ6|1|RA|A|716
6BZ6|1|RA|G|717
6BZ6|1|RA|A|718
6BZ6|1|RA|C|719

Current chains

Chain RA
23S rRNA

Nearby chains

Chain QA
Small subunit ribosomal RNA; SSU rRNA
Chain QO
30S ribosomal protein S15
Chain QQ
30S ribosomal protein S17

Coloring options:


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