HL_6BZ6_084

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

6BZ6|1|RA|A|1913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_084 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.1407

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

6BZ6|1|RA|G|1910
6BZ6|1|RA|U|1911
6BZ6|1|RA|A|1912
6BZ6|1|RA|A|1913
6BZ6|1|RA|C|1914
6BZ6|1|RA|U|1915
6BZ6|1|RA|A|1916
6BZ6|1|RA|U|1917
6BZ6|1|RA|A|1918
6BZ6|1|RA|A|1919
6BZ6|1|RA|C|1920

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain QV

Transfer RNA; tRNA