3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
GUGAAGAUGC
Length
10 nucleotides
Bulged bases
6BZ6|1|RA|A|2030, 6BZ6|1|RA|A|2031, 6BZ6|1|RA|G|2032
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ6_086 not in the Motif Atlas
Homologous match to HL_7RQB_050
Geometric discrepancy: 0.0656
The information below is about HL_7RQB_050
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_90642.6
Basepair signature
cWW-tWH-F-F-F
Number of instances in this motif group
6

Unit IDs

6BZ6|1|RA|G|2027
6BZ6|1|RA|U|2028
6BZ6|1|RA|G|2029
6BZ6|1|RA|A|2030
6BZ6|1|RA|A|2031
6BZ6|1|RA|G|2032
6BZ6|1|RA|A|2033
6BZ6|1|RA|U|2034
6BZ6|1|RA|G|2035
6BZ6|1|RA|C|2036

Current chains

Chain RA
23S rRNA

Nearby chains

Chain R5
50S ribosomal protein L32
Chain RE
50S ribosomal protein L3

Coloring options:


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