HL_6BZ6_138

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

CUACGG

Length

6 nucleotides

Bulged bases

6BZ6|1|XA|U|1450, 6BZ6|1|XA|A|1451, 6BZ6|1|XA|G|1453

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_138 not in the Motif Atlas

Geometric match to HL_5T16_002

Geometric discrepancy: 0.2387

The information below is about HL_5T16_002

Detailed Annotation

Mini UNCG

Broad Annotation

No text annotation

Motif group

HL_56334.1

Basepair signature

cWW-F

Number of instances in this motif group

16

Unit IDs

6BZ6|1|XA|C|1449
6BZ6|1|XA|U|1450
6BZ6|1|XA|A|1451
6BZ6|1|XA|C|1452
6BZ6|1|XA|G|1453
6BZ6|1|XA|G|1454

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XT

30S ribosomal protein S20