HL_6BZ6_172

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

CUUAGAAGCAG

Length

11 nucleotides

Bulged bases

6BZ6|1|YA|U|1066, 6BZ6|1|YA|A|1070

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_172 not in the Motif Atlas

Homologous match to HL_6PRV_001

Geometric discrepancy: 0.4061

The information below is about HL_6PRV_001

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19210.3

Basepair signature

cWW-F-F-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6BZ6|1|YA|C|1064
6BZ6|1|YA|U|1065
6BZ6|1|YA|U|1066
6BZ6|1|YA|A|1067
6BZ6|1|YA|G|1068
6BZ6|1|YA|A|1069
6BZ6|1|YA|A|1070
6BZ6|1|YA|G|1071
6BZ6|1|YA|C|1072
6BZ6|1|YA|A|1073
6BZ6|1|YA|G|1074

Current chains

Chain YA

23S rRNA

Nearby chains