HL_6BZ6_173

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

CGUAAUAG

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_173 not in the Motif Atlas

Homologous match to HL_6PRV_002

Geometric discrepancy: 0.5694

The information below is about HL_6PRV_002

Detailed Annotation

GNRA wlth tandem sheared

Broad Annotation

No text annotation

Motif group

HL_98423.1

Basepair signature

cWW-F

Number of instances in this motif group

10

Unit IDs

6BZ6|1|YA|C|1092
6BZ6|1|YA|G|1093
6BZ6|1|YA|U|1094
6BZ6|1|YA|A|1095
6BZ6|1|YA|A|1096
6BZ6|1|YA|U|1097
6BZ6|1|YA|A|1098
6BZ6|1|YA|G|1099

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YH

50S ribosomal protein L6