3D structure

PDB id
6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.18 Å

Loop

Sequence
CGUCCACAG
Length
9 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ6_204 not in the Motif Atlas
Homologous match to HL_4WF9_056
Geometric discrepancy: 0.1351
The information below is about HL_4WF9_056
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_32735.2
Basepair signature
cWW-tSH-F-F-F-F-F
Number of instances in this motif group
7

Unit IDs

6BZ6|1|YA|C|2471
6BZ6|1|YA|G|2472
6BZ6|1|YA|U|2473
6BZ6|1|YA|C|2474
6BZ6|1|YA|C|2475
6BZ6|1|YA|A|2476
6BZ6|1|YA|C|2477
6BZ6|1|YA|A|2478
6BZ6|1|YA|G|2479

Current chains

Chain YA
23S rRNA

Nearby chains

Chain Y9
50S ribosomal protein L36
Chain YH
50S ribosomal protein L6
Chain YQ
50S ribosomal protein L16

Coloring options:


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