HL_6BZ6_205

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

UGAAGAAG

Length

8 nucleotides

Bulged bases

6BZ6|1|YA|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_205 not in the Motif Atlas

Homologous match to HL_7RQB_061

Geometric discrepancy: 0.0892

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

6BZ6|1|YA|U|2528
6BZ6|1|YA|G|2529
6BZ6|1|YA|A|2530
6BZ6|1|YA|A|2531
6BZ6|1|YA|G|2532
6BZ6|1|YA|A|2533
6BZ6|1|YA|A|2534
6BZ6|1|YA|G|2535

Current chains

Chain YA

23S rRNA

Nearby chains

Chain Y9

50S ribosomal protein L36

Chain YH

50S ribosomal protein L6