HL_6BZ6_224

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

CCUACGUG

Length

8 nucleotides

Bulged bases

6BZ6|1|XA|A|344, 6BZ6|1|XA|C|345, 6BZ6|1|XA|U|347

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_224 not in the Motif Atlas

Geometric match to HL_8KAH_003

Geometric discrepancy: 0.3595

The information below is about HL_8KAH_003

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_89457.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

2

Unit IDs

6BZ6|1|XA|C|341
6BZ6|1|XA|C|342
6BZ6|1|XA|U|343
6BZ6|1|XA|A|344
6BZ6|1|XA|C|345
6BZ6|1|XA|G|346
6BZ6|1|XA|U|347
6BZ6|1|XA|G|348

Current chains

Chain XA

16S rRNA

Nearby chains

Chain YO

50S ribosomal protein L14

Chain YT

50S ribosomal protein L19