HL_6BZ6_230

3D structure

PDB id

6BZ6 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S complex containing 16S G347U ram mutation and empty A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.18 Å

Loop

Sequence

GACGGAAAU

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ6_230 not in the Motif Atlas

Homologous match to HL_5J7L_219

Geometric discrepancy: 0.2871

The information below is about HL_5J7L_219

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_50860.2

Basepair signature

cWW-F-cWH-F-F-F-F

Number of instances in this motif group

6

Unit IDs

6BZ6|1|YA|G|2304
6BZ6|1|YA|A|2305
6BZ6|1|YA|C|2306
6BZ6|1|YA|G|2307
6BZ6|1|YA|G|2308
6BZ6|1|YA|A|2309
6BZ6|1|YA|A|2310
6BZ6|1|YA|A|2311
6BZ6|1|YA|U|2312

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YG

50S ribosomal protein L5