HL_6BZ7_116

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GGUAAUGGC

Length

9 nucleotides

Bulged bases

6BZ7|1|XA|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ7_116 not in the Motif Atlas

Homologous match to HL_4LFB_006

Geometric discrepancy: 0.1234

The information below is about HL_4LFB_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_84299.4

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

6BZ7|1|XA|G|259
6BZ7|1|XA|G|260
6BZ7|1|XA|U|261
6BZ7|1|XA|A|262
6BZ7|1|XA|A|263
6BZ7|1|XA|U|264
6BZ7|1|XA|G|265
6BZ7|1|XA|G|266
6BZ7|1|XA|C|267

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XQ

30S ribosomal protein S17

Chain XT

30S ribosomal protein S20