3D structure

PDB id
6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.
Experimental method
X-RAY DIFFRACTION
Resolution
3.68 Å

Loop

Sequence
GAUUAGAUACC
Length
11 nucleotides
Bulged bases
6BZ7|1|XA|U|793
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ7_127 not in the Motif Atlas
Homologous match to HL_4LFB_017
Geometric discrepancy: 0.1527
The information below is about HL_4LFB_017
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

6BZ7|1|XA|G|786
6BZ7|1|XA|A|787
6BZ7|1|XA|U|788
6BZ7|1|XA|U|789
6BZ7|1|XA|A|790
6BZ7|1|XA|G|791
6BZ7|1|XA|A|792
6BZ7|1|XA|U|793
6BZ7|1|XA|A|794
6BZ7|1|XA|C|795
6BZ7|1|XA|C|796

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XK
30S ribosomal protein S11
Chain XV
Transfer RNA; tRNA
Chain XW
Transfer RNA; tRNA
Chain XX
messenger RNA
Chain YA
Large subunit ribosomal RNA; LSU rRNA

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