HL_6BZ7_158

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

UUGGGAAG

Length

8 nucleotides

Bulged bases

6BZ7|1|YA|A|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ7_158 not in the Motif Atlas

Homologous match to HL_7A0S_010

Geometric discrepancy: 0.1436

The information below is about HL_7A0S_010

Detailed Annotation

T-loop with 1 bulged base

Broad Annotation

T-loop

Motif group

HL_01609.3

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

18

Unit IDs

6BZ7|1|YA|U|305
6BZ7|1|YA|U|306
6BZ7|1|YA|G|307
6BZ7|1|YA|G|308
6BZ7|1|YA|G|309
6BZ7|1|YA|A|310
6BZ7|1|YA|A|311
6BZ7|1|YA|G|312

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YY

50S ribosomal protein L24