HL_6BZ7_199

3D structure

PDB id

6BZ7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G299A point mutation and near-cognate ASL Leucine in A site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.68 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

6BZ7|1|YA|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ7_199 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.1475

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

6BZ7|1|YA|G|1949
6BZ7|1|YA|G|1950
6BZ7|1|YA|U|1951
6BZ7|1|YA|A|1952
6BZ7|1|YA|A|1953
6BZ7|1|YA|G|1954
6BZ7|1|YA|U|1955
6BZ7|1|YA|U|1956
6BZ7|1|YA|C|1957

Current chains

Chain YA

23S rRNA

Nearby chains

Chain XA

Small subunit ribosomal RNA; SSU rRNA

Chain YO

50S ribosomal protein L14