3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
CGGUGAAAUG
Length
10 nucleotides
Bulged bases
None detected
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ8_015 not in the Motif Atlas
Homologous match to HL_5J7L_015
Geometric discrepancy: 0.1599
The information below is about HL_5J7L_015
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.5
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
11

Unit IDs

6BZ8|1|QA|C|689
6BZ8|1|QA|G|690
6BZ8|1|QA|G|691
6BZ8|1|QA|U|692
6BZ8|1|QA|G|693
6BZ8|1|QA|A|694
6BZ8|1|QA|A|695
6BZ8|1|QA|A|696
6BZ8|1|QA|U|697
6BZ8|1|QA|G|698

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QG
30S ribosomal protein S7
Chain QK
30S ribosomal protein S11
Chain QW
Transfer RNA; tRNA
Chain RA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


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