3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
GAUUAGAUACC
Length
11 nucleotides
Bulged bases
6BZ8|1|QA|U|793
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ8_017 not in the Motif Atlas
Homologous match to HL_6CZR_088
Geometric discrepancy: 0.19
The information below is about HL_6CZR_088
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_75293.4
Basepair signature
cWW-F-F-F-F-F-F-F-F
Number of instances in this motif group
13

Unit IDs

6BZ8|1|QA|G|786
6BZ8|1|QA|A|787
6BZ8|1|QA|U|788
6BZ8|1|QA|U|789
6BZ8|1|QA|A|790
6BZ8|1|QA|G|791
6BZ8|1|QA|A|792
6BZ8|1|QA|U|793
6BZ8|1|QA|A|794
6BZ8|1|QA|C|795
6BZ8|1|QA|C|796

Current chains

Chain QA
16S rRNA

Nearby chains

Chain QK
30S ribosomal protein S11
Chain QV
Transfer RNA; tRNA
Chain QW
Transfer RNA; tRNA
Chain QX
messenger RNA
Chain RA
Large subunit ribosomal RNA; LSU rRNA

Coloring options:


Copyright 2025 BGSU RNA group. Page generated in 0.2381 s