HL_6BZ8_089

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GGUAAGUUC

Length

9 nucleotides

Bulged bases

6BZ8|1|RA|U|1955

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ8_089 not in the Motif Atlas

Homologous match to HL_5J7L_182

Geometric discrepancy: 0.1757

The information below is about HL_5J7L_182

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_20167.2

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

10

Unit IDs

6BZ8|1|RA|G|1949
6BZ8|1|RA|G|1950
6BZ8|1|RA|U|1951
6BZ8|1|RA|A|1952
6BZ8|1|RA|A|1953
6BZ8|1|RA|G|1954
6BZ8|1|RA|U|1955
6BZ8|1|RA|U|1956
6BZ8|1|RA|C|1957

Current chains

Chain RA

23S rRNA

Nearby chains

Chain QA

Small subunit ribosomal RNA; SSU rRNA

Chain RO

50S ribosomal protein L14