HL_6BZ8_117

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

GGUAAUGGC

Length

9 nucleotides

Bulged bases

6BZ8|1|XA|G|266

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ8_117 not in the Motif Atlas

Homologous match to HL_4LFB_006

Geometric discrepancy: 0.1068

The information below is about HL_4LFB_006

Detailed Annotation

GNRA related

Broad Annotation

GNRA related

Motif group

HL_36455.1

Basepair signature

cWW-F-F-F-F-F-F

Number of instances in this motif group

7

Unit IDs

6BZ8|1|XA|G|259
6BZ8|1|XA|G|260
6BZ8|1|XA|U|261
6BZ8|1|XA|A|262
6BZ8|1|XA|A|263
6BZ8|1|XA|U|264
6BZ8|1|XA|G|265
6BZ8|1|XA|G|266
6BZ8|1|XA|C|267

Current chains

Chain XA

16S rRNA

Nearby chains

Chain XQ

30S ribosomal protein S17

Chain XT

30S ribosomal protein S20