3D structure

PDB id
6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site
Experimental method
X-RAY DIFFRACTION
Resolution
3.74 Å

Loop

Sequence
CGAAGCAACGCG
Length
12 nucleotides
Bulged bases
6BZ8|1|XA|G|971
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
HL_6BZ8_132 not in the Motif Atlas
Geometric match to HL_8KAH_003
Geometric discrepancy: 0.3076
The information below is about HL_8KAH_003
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_89457.1
Basepair signature
cWW-F-F-F
Number of instances in this motif group
2

Unit IDs

6BZ8|1|XA|C|962
6BZ8|1|XA|G|963
6BZ8|1|XA|A|964
6BZ8|1|XA|A|965
6BZ8|1|XA|G|966
6BZ8|1|XA|C|967
6BZ8|1|XA|A|968
6BZ8|1|XA|A|969
6BZ8|1|XA|C|970
6BZ8|1|XA|G|971
6BZ8|1|XA|C|972
6BZ8|1|XA|G|973

Current chains

Chain XA
16S rRNA

Nearby chains

Chain XI
30S ribosomal protein S9
Chain XJ
30S ribosomal protein S10
Chain XN
30S ribosomal protein S14 type Z
Chain XV
Transfer RNA; tRNA
Chain XY
ASL Leu

Coloring options:


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