HL_6BZ8_178

3D structure

PDB id

6BZ8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Thermus thermophilus 70S containing 16S G347U point mutation and near-cognate ASL Leucine in A site

Experimental method

X-RAY DIFFRACTION

Resolution

3.74 Å

Loop

Sequence

CGAUAACG

Length

8 nucleotides

Bulged bases

6BZ8|1|YA|U|958, 6BZ8|1|YA|C|961

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_6BZ8_178 not in the Motif Atlas

Homologous match to HL_7RQB_027

Geometric discrepancy: 0.1098

The information below is about HL_7RQB_027

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

6BZ8|1|YA|C|955
6BZ8|1|YA|G|956
6BZ8|1|YA|A|957
6BZ8|1|YA|U|958
6BZ8|1|YA|A|959
6BZ8|1|YA|A|960
6BZ8|1|YA|C|961
6BZ8|1|YA|G|962

Current chains

Chain YA

23S rRNA

Nearby chains

Chain YB

5S ribosomal RNA; 5S rRNA

Chain YQ

50S ribosomal protein L16